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Table 1 Genes and SNPs studied

From: CALCA and TRPV1 genes polymorphisms are related to a good outcome in female chronic migraine patients treated with OnabotulinumtoxinA

GEN

SNP

NM

NP

OMIM

POSITION

Genes related to glutamate homeostasis

 MEF2D

rs1050316

NM_001271629.1:c.*2734C>A

–

608320

15q26.3

 LRP1

rs11172113

NM_002332.2:c.67+4469T>C

–

190182

3p24.1

 MTDH

rs1835740

NC_000008.10:g.98166913 T > C

–

610323

8q22.1

 EAAT2

rs4354668

NM_001195728.2:c.-130+507A>C

–

600300

11p13

 GRIK3

rs6691840

NM_000831.3:c.928T>C

NP_000822.2:p.Ser310Ala

138243

1p34.3

Gene which encodes for CGRP

 CALCA

rs3781719

NC_000021.8:g.22052312C>T

–

114130

11p15.2

rs145837941

NM_001033952.2:c.197 T > C

NP_001029124.1:p.Leu66Pro

Genes of the GABA system

 GABRE

rs1139916

NM_004961.3:c.304T>G

NP_004952.2:p.Ser102Ala

300093

Xq28

 GABRQ

rs3810651

NM_018558.3:c.1432A

NP_061028.3:p.Ile478Phe

300349

 GABRA3

rs6627221

NM_000808.3:c.551+8376A>G

–

305660

rs2201169

NM_000808.3:c.262+23738T>C

–

Genes which encode voltage dependant channels

 SCN9A

rs6746030

NM_002977.2:c.3448C

NP_002968.1:p.Arg1150,

603415

2q24.3

 KCNS1

rs734784

NM_002251.3:c.1465A>G

NP_002242.2:p.Ile489Val

602905

20q13.12

 P2RX7

rs2230912

NM_002562.5:c.1379A>G

NP_002553.3:p.Gln460Arg

602566

12q24.31

rs1718119

NM_002562.5:c.1042G>A

NP_002553.3:p.Ala348Thr

Gene which encodes the D2 dopamine receptor

 DRD2(ANKK1)

rs1800497

NM_178510.1:c.2137G>A

NP_848605.1:p.Glu713Lys

608,774

11q23.2

Gene of the 5-HT2C serotonin receptor

 HTR2C

rs3813929

NM_000868.2:c.-759C>T

–

312861

Xq23

Genes of the TRP family

 TRPV1

rs222749

NM_018727.5:c.271C>T

NP_061197.4:p.Pro91Ser

602076

17p13.2

rs222747

NM_018727.5:c.945G>C

NP_061197.4:p.Met315Ile

rs222741

NM_080704.3:c.-34+2841C>T

–

 TRPV3

rs7217270

NM_001258205.1:c.2085+395T>C

–

607066

17p13.2

 TRPM8

rs10166942

NM_024080.4:c.-990T>C

–

606678

2q37.1

Other genes studied

 WFS1

rs734312

NM_001145853.1:c.1832G>A

NP_001139325.1:p.Arg611His

606201

4p16.1

 TGFBR2

rs7640543

NC_000003.11:g.30462403G > A

–

190182

3p24.1

 MTHFR

rs121434294

NM_005957.4:c.547C > T

NP_005948.3:p.Arg183Ter

607,093

1p36.3