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Table 1 Summary of the results obtained for the 34 SNPs from Gormley et al. genotyped in the menstrual migraine population

From: The NRP1 migraine risk variant shows evidence of association with menstrual migraine

Locus

CHS

Index SNP

Minor allele

MAF controls

MAF cases

OR (95% CI)

p-value

LRP1-STAT6-SDR9C7

12

rs11172113

C

0.3571

 

0.7312 (0.5183–1.032)

0.0742

FHL5-URF1

6

rs4839827

T

0.497

0.4879

0.9098 (0.6671–1.241)

0.5506

rs7775721

T

0.3779

0.4013

1.104 (0.8068–1.51)

0.5367

Near TSPAN2-NGF

1

rs2078371

C

0.1192

0.1239

1.045 (0.6542–1.668)

0.8549

rs7544256

A

0.3893

0.3778

0.9405 (0.6874–1.287)

0.7012

TRPM8-HJURP

2

rs10166942

C

0.2045

0.1806

0.8609 (0.5858–1.265)

0.4456

rs566529

G

0.1789

0.1401

0.748 (0.4816–1.162)

0.1954

rs6724624

C

0.2365

0.2589

1.39 (0.9593–2.013)

0.08106

PHACTR1

6

rs9349379

G

0.3821

0.3523

0.8804 (0.6365–1.1218)

0.4415

MEF2D

1

rs1925950

G

0.3566

0.4189

1.31 (0.9557–1.797)

0.09287

Near FGF6

12

rs1024905

G

0.4511

0.4762

0.904 (0.6636–1.232)

0.5225

PLCE

10

rs10786156

G

0.4665

0.466

0.9669 (0.7011–1.333)

0.8372

rs75473620

T

0.05479

0.05523

1.036 (0.5016–2.141)

0.9235

KCNK5

6

rs10456100

T

0.2863

0.2851

0.9943 (0.7103–1.392)

0.9733

ASTN2

9

rs6478241

A

0.3575

0.3649

1.091 (0.7911–1.504)

0.5958

CFDP1

16

rs8046696

T

0.4476

0.4552

1.087 (0.7987–1.4979_

0.5965

RNF213

17

rs17857135

C

0.171

0.1689

0.9623 (0.6404–1.446)

0.8532

NRP1

10

rs2506142

G

0.1163

0.2054

1.965 (1.244–3.102

0.00335*

Near GPR149

3

rs13078967

C

0.01705

0.01802

1.174 (0.3501–3.938)

0.7945

Near REST-SPINK2

4

rs7684253

C

0.4887

0.4667

0.8045 (0.5924–1.093)

0.1633

Near ZCCHC14

16

rs4081947

G

0.3809

0.3927

1.133 (0.817–1.572)

0.4537

HEY2-NCOA7

6

rs1268083

C

0.4957

0.5158

1.212 (0.8921–1.646)

0.2187

Near WSCD1-NRP1

17

rs75213074

T

0.0178

0.02821

0.7476 (0.2256–2.477)

0.633

Near TGFBR2

3

rs6791480

T

0.3218

0.352

1.395 (0.9702–2.007)

0.07192

Near ITPK1

14

rs11624776

C

0.3617

0.3399

0.7676 (0.5605–1.051)

0.0987

Near ADAMTSL4-ECM1

1

rs6693567

C

0.2914

0.3168

1.425 (0.9848–2.062)

0.05964

Near CCM2L-HCK

20

rs144017103

T

0.02821

0.02821

1.013 (0.3873–2.649)

0.9792

YAP1

11

rs10895275

A

0.3288

0.3309

1.02 (0.7056–1.475)

0.9149

Near MED14-USP9X

X

rs12845494

G

0.209

0.2441

1.222 (0.8362–1.787)

0.2996

Near DOCK4-IMMP2L

7

rs10155855

T

0.05241

0.04933

0.8475 (0.4316–1.664)

0.6305

1p31.1

1

rs1572668

G

0.4677

0.4948

1.114 (0.8095–1.534)

0.5064

ARMS2-HTRA1

10

rs2223089

C

0.09218

0.08772

0.8654 (0.515–1.454)

0.5849

IGSF9B

11

rs561561

T

0.105

0.1123

1.244 (0.7465–2.075)

0.401

MPPED2

11

rs11031122

C

0.2247

0.2222

0.9619 (0.6685–1.384)

0.8343

  1. CHS chromosome Homo sapiens, SNP single nucleotide polymorphism, MAF minor allele frequency, OR odds ratio, CI confidence interval
  2. *The SNP located near NRP1 (rs2506142) is significant at p-value < 0.05