From: The NRP1 migraine risk variant shows evidence of association with menstrual migraine
Locus | CHS | Index SNP | Minor allele | MAF controls | MAF cases | OR (95% CI) | p-value |
---|---|---|---|---|---|---|---|
LRP1-STAT6-SDR9C7 | 12 | rs11172113 | C | 0.3571 |  | 0.7312 (0.5183–1.032) | 0.0742 |
FHL5-URF1 | 6 | rs4839827 | T | 0.497 | 0.4879 | 0.9098 (0.6671–1.241) | 0.5506 |
rs7775721 | T | 0.3779 | 0.4013 | 1.104 (0.8068–1.51) | 0.5367 | ||
Near TSPAN2-NGF | 1 | rs2078371 | C | 0.1192 | 0.1239 | 1.045 (0.6542–1.668) | 0.8549 |
rs7544256 | A | 0.3893 | 0.3778 | 0.9405 (0.6874–1.287) | 0.7012 | ||
TRPM8-HJURP | 2 | rs10166942 | C | 0.2045 | 0.1806 | 0.8609 (0.5858–1.265) | 0.4456 |
rs566529 | G | 0.1789 | 0.1401 | 0.748 (0.4816–1.162) | 0.1954 | ||
rs6724624 | C | 0.2365 | 0.2589 | 1.39 (0.9593–2.013) | 0.08106 | ||
PHACTR1 | 6 | rs9349379 | G | 0.3821 | 0.3523 | 0.8804 (0.6365–1.1218) | 0.4415 |
MEF2D | 1 | rs1925950 | G | 0.3566 | 0.4189 | 1.31 (0.9557–1.797) | 0.09287 |
Near FGF6 | 12 | rs1024905 | G | 0.4511 | 0.4762 | 0.904 (0.6636–1.232) | 0.5225 |
PLCE | 10 | rs10786156 | G | 0.4665 | 0.466 | 0.9669 (0.7011–1.333) | 0.8372 |
rs75473620 | T | 0.05479 | 0.05523 | 1.036 (0.5016–2.141) | 0.9235 | ||
KCNK5 | 6 | rs10456100 | T | 0.2863 | 0.2851 | 0.9943 (0.7103–1.392) | 0.9733 |
ASTN2 | 9 | rs6478241 | A | 0.3575 | 0.3649 | 1.091 (0.7911–1.504) | 0.5958 |
CFDP1 | 16 | rs8046696 | T | 0.4476 | 0.4552 | 1.087 (0.7987–1.4979_ | 0.5965 |
RNF213 | 17 | rs17857135 | C | 0.171 | 0.1689 | 0.9623 (0.6404–1.446) | 0.8532 |
NRP1 | 10 | rs2506142 | G | 0.1163 | 0.2054 | 1.965 (1.244–3.102 | 0.00335* |
Near GPR149 | 3 | rs13078967 | C | 0.01705 | 0.01802 | 1.174 (0.3501–3.938) | 0.7945 |
Near REST-SPINK2 | 4 | rs7684253 | C | 0.4887 | 0.4667 | 0.8045 (0.5924–1.093) | 0.1633 |
Near ZCCHC14 | 16 | rs4081947 | G | 0.3809 | 0.3927 | 1.133 (0.817–1.572) | 0.4537 |
HEY2-NCOA7 | 6 | rs1268083 | C | 0.4957 | 0.5158 | 1.212 (0.8921–1.646) | 0.2187 |
Near WSCD1-NRP1 | 17 | rs75213074 | T | 0.0178 | 0.02821 | 0.7476 (0.2256–2.477) | 0.633 |
Near TGFBR2 | 3 | rs6791480 | T | 0.3218 | 0.352 | 1.395 (0.9702–2.007) | 0.07192 |
Near ITPK1 | 14 | rs11624776 | C | 0.3617 | 0.3399 | 0.7676 (0.5605–1.051) | 0.0987 |
Near ADAMTSL4-ECM1 | 1 | rs6693567 | C | 0.2914 | 0.3168 | 1.425 (0.9848–2.062) | 0.05964 |
Near CCM2L-HCK | 20 | rs144017103 | T | 0.02821 | 0.02821 | 1.013 (0.3873–2.649) | 0.9792 |
YAP1 | 11 | rs10895275 | A | 0.3288 | 0.3309 | 1.02 (0.7056–1.475) | 0.9149 |
Near MED14-USP9X | X | rs12845494 | G | 0.209 | 0.2441 | 1.222 (0.8362–1.787) | 0.2996 |
Near DOCK4-IMMP2L | 7 | rs10155855 | T | 0.05241 | 0.04933 | 0.8475 (0.4316–1.664) | 0.6305 |
1p31.1 | 1 | rs1572668 | G | 0.4677 | 0.4948 | 1.114 (0.8095–1.534) | 0.5064 |
ARMS2-HTRA1 | 10 | rs2223089 | C | 0.09218 | 0.08772 | 0.8654 (0.515–1.454) | 0.5849 |
IGSF9B | 11 | rs561561 | T | 0.105 | 0.1123 | 1.244 (0.7465–2.075) | 0.401 |
MPPED2 | 11 | rs11031122 | C | 0.2247 | 0.2222 | 0.9619 (0.6685–1.384) | 0.8343 |